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Communication and identification of DNA based fungal species
TH003938: Amanita gemmata (Fr.) Bertill. | SH179037.07FU | DOI: 10.15156/BIO/SH179037.07FU | New version of this SH is available: SH1553673.08FU

Distance to the closest SH: 1.5
No. of sequences in SH: 8

Placement in the fungal classification
Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Amanitaceae; Amanita
Index Fungorum: urn:lsid:indexfungorum.org:names:202929

Representative sequence: GQ250406
Chosen by: automatically by the program
Date: 2013-11-19

Distribution of distances 
SH graph
Newer version(s) of this SH is/are available
SH code (Count*/Total count**)
SH1553673.08FU (8/29);
*Number of sequences carried over from pervious version
**Total number of sequences composing this SH in current version
Older version(s) of this SH is/are available
SH code (Count*/Total count**)
SH200315.06FU (5/8);
*Number of sequences carried over from previous version
**Total number of sequences composing this SH in current version
Distribution map
*Locations without exact coordinates are displayed as spherical country centroids
% 
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Accession numberUNITE taxon nameINSD taxon nameSequence sourceInteracting taxaSampling area<.50.51.01.52.02.53.0  Alignment  
GQ250406AmanitaAmanita (Amanita aff. pantherina 08...United States              -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGGATCATT-ATTGAA------------------------------------------------------------AT---AA--A-ACT-----C-G-GGC-A----G--GGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGTTGT-----AGCTGG-CCCC-----T--A-GGGGC-ATGTGC-ACAC----------TG--TCTC--TCTC-TTGCTTG---------------TTTTTTT-CATTCTTTCCACTT-GTGCACTG-CTTGT-AGGC-A-G-------CC--TG------G-------CACT-G--TTCA-----GG-TTGTCTATG-A-TTTTC-TTT--AC--ATAC----ATG---A---ATCA--TTGTTGTAC--AGAATG-TGAT--A----------A-AAAAG--------------------------------AGTAATACAACTTTCAACAA-CGGA-TCTC-TTGGCTCTCGC-ATCGATGAAGAACGCA-GCGAAATGCGATAAGTAATGTGAATT-GCAGAATTC-AGTGAATCATC-GAATC-TTTGAACGCATCTTGCGCTCCTTGGTATTCCGAGGAGCA-TGCCTGTTTGAGTGTCA-TTAAATTCTCTC-AAA----A---CATACA-C-T--T----GA-----GTG---TGTTTTGG-A-TTGT-GGGAGTGT-CTGCTGGC----TTG-TTT----------ATACAT---------------GA-G-CCAGCTCTCCTG-AAAGAC--ATTAGC-TTT----GGGGGGG-A-TGTG-C-CAAGTCACTT--C-TG------------------------------------CCTTTCCATT-------------------------GGTGT-GATAGATGAAT--AAACTTATCTA-CGCCAGG-AAAG--CA----------GGTTGCAGGT-G---AAA-GCAC-T-GT-G-----ATCTC------------------------T-CTGCTCTCT----AA-TT--GA-C-A--------TTT-GTC---TGATAA--------------------------------------------------------------------------------------------------------------------------------------------------------
HM240517Amanita pantherinaAmanita pantherina (Amanita panther...Canada              -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATT-ATTGAG------------------------------------------------------------AT---AA--A-ACT-----C-G-GGC-A----G--GGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGTTGT-----AGCTGG-CCCC-----T--A-GGGGC-ATGTGC-ACAC----------TG--TCTC--TCTC-TTGCTTG---------------TTTTTTT-CATTCTTTCCACTT-GTGCACTG-CTTGT-AGGC-A-G-------CC--TG------G-------CACT-G--TTCA-----GG-TTGTCTATG-A-TTTTC-TTT--AC--ATAC----ATG---A---ATCA--TTGTTGTAC--AGAATG-TGAT--A----------A-AAAAG--------------------------------AGTAATACAACTTTCAACAA-CGGA-TCTC-TTGGCTCTCGC-ATCGATGAAGAACGCA-GCGAAATGCGATAAGTAATGTGAATT-GCAGAATTC-AGTGAATCATC-GAATC-TTTGAACGCATCTTGCGCTCCTTGGTATTCCGAGGAGCA-TGCCTGTTTGAGTGTCA-TTAAATTCTCTC-AAA----A---CATACA-C-T--T----GA-----GTG---TGTTTTGG-A-TTGT-GGGAGTGT-CTGCTGGC----TTG-TTT----------ATACAT---------------GA-G-CCAGCTCTCCTG-AAAGAC--ATTAGC-TTT----GGGGGGG-A-TGTG-C-CAAGTCACTT--C-TG------------------------------------CCTTTCCATT-------------------------GGTGT-GATAGATGAAT--AAACTTATCTA-CGCCAGG-AAAG--CA----------GGTTGCAGGT-G---AAA-GCAC-T-GT-G-----ATCTC------------------------T-CTGCTCTCT----AA-TT--GA-C-A--------TTT-GTC---TGATAA--------------------------------------------------------------------------------------------------------------------------------------------------------
HQ604824Amanita gemmataAmanita gemmata (Amanita gemmata)Canada              -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAG------------------------------------------------------------AT---AA--A-ACT-----C-G-GGC-A----G--GGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGTTGT-----AGCTGG-CCCC-----T--A-GGGGC-ATGTGC-ACAC----------TG--TCTC--TCTC-TTGCTTG---------------TTTTTTT-CATTCTTTCCACTT-GTGCACTG-CTTGT-AGGC-A-G-------CC--TG------G-------CACT-G--TTCA-----GG-TTGTCTATG-A-TTTTC-TTT--AC--ATAC----ATG---A---ATCA--TTGTTGTAC--AGAATG-TGAT--A----------A-AAAAG--------------------------------AGTAATACAACTTTCAACAA-CGGA-TCTC-TTGGCTCTCGC-ATCGATGAAGAACGCA-GCGAAATGCGATAAGTAATGTGAATT-GCAGAATTC-AGTGAATCATC-GAATC-TTTGAACGCATCTTGCGCTCCTTGGTATTCCGAGGAGCA-TGCCTGTTTGAGTGTCA-TTAAATTCTCTC-AAA----A---CATACA-C-T--T----GA-----GTG---TGTTTTGG-A-TTGT-GGGAGTGT-CTGCTGGC----TTG-TTT----------ATACAT---------------GA-G-CCAGCTCTCCTG-AAAGAC--ATTAGC-TTT----GGGGGGG-A-TGTG-C-CAAGTCACTT--C-TG------------------------------------CCTTTCCATT-------------------------GGTGT-GATAGATGAAT--AAACTTATCTA-CGCCAGG-AAAG--CA----------GGTTGCAGGT-G---AAA-GCAC-T-GT-G-----ATCTC------------------------T-CTGCTCTCT----AA-TT--GA-C-A--------TTT-GTC---TGATAA--------------------------------------------------------------------------------------------------------------------------------------------------------
**KX236120Amanita gemmataAmanita gemmata (Amanita gemmata)Canada              -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-ATTGAA------------------------------------------------------------AT---AA--A-ACT-----C-G-GGC-A----G--GGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGTTGT-----AGCTGG-CCCC-----T--A-GGGGC-ATGTGC-ACAC----------TG--TCTC--TCTC-TTGCTTG---------------TTTTTTT-CATTCTTTCCACTT-GTGCACTG-CTTGT-AGGC-A-G-------CC--TG------G-------CACT-G--TTCA-----GG-TTGTCTATG-A-TTTTC-TTT--AC--ATAC----ATG---A---ATCA--TTGTTGTACA-AGAATG-TGAT--A----------A-AAAAG--------------------------------AGTAATACAACTTTCAACAA-CGGA-TCTC-TTGGCTCTCGC-ATCGATGAAGAACGCA-GCGAAATGCGATAAGTAATGTGAATT-GCAGAATTC-AGTGAATCATC-GAATC-TTTGAACGCATCTTGCGCTCCTTGGTATTCCGAGGAGCA-TGCCTGTTTGAGTGTCA-TTAAATTCTCTC-AAA----A---CATACA-C-T--T----GA-----GTG---TGTTTTGG-A-TTGT-GGGAGTGT-CTGCTGGC----TTG-TTT----------ATACAT---------------GA-G-CCAGCTCTCCTG-AAAGAC--ATTANC-TTT----GGGGGGG-A-TGTG-C-CAAGTCACTT--C-TG------------------------------------CCTTTCCATT-------------------------GGTGT-GATAGATGAAT--AAACTTATCTA-CGCCAGG-AAAG--CA----------GGTTGCAGGT-G---AAA-GCAC-T-GT-G-----ATCTC------------------------T-CTGCTCTCT----AA-TT--GA-C-A--------TTT-GTC---TGATAACTTG-------------------ACC------------------------------------------------------------------------------------------------------------------------------
**UDB033205Amanita gemmataFruitbodyCanada              --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCATT-ATTGAA------------------------------------------------------------AT---AA--A-ACT-----C-G-GGC-A----G--GGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGTTGT-----AGCTGG-CCCC-----T--A-GGGGC-ATGTGC-ACAC----------TG--TCTC--TCTC-TTGCTTG---------------TTTTTTT-CATTCTTTCCACTT-GTGCACTG-CTTGT-AGGC-A-G-------CC--TG------G-------CACT-G--TTCA-----GG-TTGTCTATG-A-TTTTC-TTT--AC--ATAC----ATG---A---ACCA--TTGTTGTAC--AGAATG-TGAT--A----------A-AAAAG--------------------------------AGTAATACAACTTTCAACAA-CGGA-TCTC-TTGGCTCTCGC-ATCGATGAAGAACGCA-GCGAAATGCGATAAGTAATGTGAATT-GCAGAATTC-AGTGAATCATC-GAATC-TTTGAACGCATCTTGCGCTCCTTGGTATTCCGAGGAGCA-TGCCTGTTTGAGTGTCA-TTAAATTCTCTC-AAA----A---CATACA-C-T--T----GA-----GTG---TGTTTTGG-A-TTGT-GGGAGTGT-CTGCTGGC----TTG-TTT----------ATACAT---------------GA-G-CCAGCTCTCCTG-AAAGAC--ATTAGC-TTT----GGGGGGG-A-TGTG-C-CAAGTCACTT--C-TG------------------------------------CCTTTCCATT-------------------------GGTGT-GATAGATGAAT--AAACTTATCTA-CGCCAGG-AAAG--CA----------GGTTGCAGGT-G---AAA-GCAC-T-GT-G-----ATCTC------------------------T-CTGCTCTCT----AA-TT--GA-C-A--------TTT-GTC---TGATAA--------------------------------------------------------------------------------------------------------------------------------------------------------
JF899545Amanita gemmataAmanita gemmata (Amanita gemmata)sampleTsuga heterophyllaCanada              -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATT-ATTGAG------------------------------------------------------------AT---AA--A-ACT-----C-G-GGC-A----G--GGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGTTGT-----AGCTGG-CCCC-----T--A-GGGGC-ATGTGC-ACAC----------TG--TCTC--TCTC-TTGCTTG---------------TTTTTTT-CATTCTTTCCACTT-GTGCACTG-CTTGT-AGGC-A-G-------CC--TG------G-------CACT-G--TTCA-----GG-TTGTCTATG-A-TTTTC-TTT--AC--ATAC----ATG---A---ATCA--TTGTTGTAC--AGAATG-TGAT--A----------A-AAAAG--------------------------------AGTAATACAACTTTCAACAA-CGGA-TCTC-TTGGCTCTCGC-ATCGATGAAGAACGCA-GCGAAATGCGATAAGTAATGTGAATT-GCAGAATTC-AGTGAATCATC-GAATC-TTTGAACGCATCTTGCGCTCCTTGGTATTCCGAGGAGCA-TGCCTGTTTGAGTGTCA-TTAAATTCTCTCAAAA----A---CATACA-C-T--T----GA-----GTG---TGTTTTGG-A-TTGT-GGGAGTGT-CTGCTGGC----TTG-TTT----------ATACAT---------------GA-G-CCAGCTCTCCTG-AAAGAC--ATTAGC-TTT----GGGGGGG-A-TGTG-C-CAAGTCACTT--C-TG------------------------------------CCTTTCCATT-------------------------GGTGT-GATAGATGAAT--AAACTTATCTA-CGCCAGG-AAAG--CA----------GGTTGCAGGT-G---AAA-GCAC-T-GT-G-----ATCTC------------------------T-CTGCTCTCT----AA-TT--GA-C-A--------TTT-GTC---TGATAA--------------------------------------------------------------------------------------------------------------------------------------------------------
KJ146699Amanita gemmataAmanita gemmata (Amanita gemmata)Canada              -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATT-ATTGAA------------------------------------------------------------AT---AA--A-ACT-----C-G-GGC-A----G--GGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGTTGT-----AGCTGG-CCCC-----T--A-GGGGC-ATGTGC-ACAC----------TG--TCTC--TCTC-TTGCTTG---------------TTTTTTTCCATTCTTTCCACTT-GTGCACTG-CTTGT-AGGC-A-G-------CC--TG------G-------CAAT-G--TTCA-----GG-TTGTCTATG-A-TTTTC-TTT--AC--ATAC----ATG---A---ATCA--TTGTTGTAC--AGAATG-TGAT--A----------A-AAAAG--------------------------------AGTAATACAACTTTCAACAA-CGGA-TCTC-TTGGCTCTCGC-ATCGATGAAGAACGCA-GCGAAATGCGATAAGTAATGTGAATT-GCAGAATTC-AGTGAATCATC-GAATC-TTTGAACGCATCTTGCGCTCCTTGGTATTCCGAGGAGCA-TGCCTGTTTGAGTGTCA-TTAAATTCTCTC-AAA----A---CATACA-C-T--T----GA-----GTG---TGTTTTGG-A-TTGT-GGGAGTGT-CTGCTGGC----TTG-TTT----------ATACAT---------------GA-G-CCAGCTCTCCTG-AAAGAC--ATTAGC-TTT----GGGGGGG-A-TGTG-C-CAAGTCACTT--C-TG------------------------------------CCTTTCCATT-------------------------GGTGT-GATAGATGAAT--AAACTTATCTA-CGCCAGG-AAAG--CA----------GGTTGCAGGT-G---AAA-GCAC-T-GT-G-----ATCTC------------------------T-CTGCTCTCT----AA-TT--GA-C-A--------TTT-GTC---TGATAA--------------------------------------------------------------------------------------------------------------------------------------------------------
HQ604823Amanita gemmataAmanita gemmata (Amanita gemmata)Canada              -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAA------------------------------------------------------------AT---AA--A-ACT-----C-G-GGC-A----G--GGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGTTGT-----AGCTGG-CCCC-----T--A-GGGGC-ATGTGC-ACAC----------TG--TCTC--TCTC-TTGCTTG---------------TTTTTTT-CATTCTTTCCACTT-GTGCACTG-CTTGT-AGGC-A-G-------CC--TG------G-------CACT-G--TTCA-----GG-TTGTCTATG-A-TTTTC-TTT--AC--ATAC----ATG---A---ATCA--TTGTTGTAC--AGAATG-TGAT--A----------A-AAAAG--------------------------------AGTAATACAACTTTCAACAA-CGGA-TCTC-TTGGCTCTCGC-ATCGATGAAGAACGCA-GCGAAATGCGATAAGTAATGTGAATT-GCAGAATTC-AGTGAATCATC-GAATC-TTTGAACGCATCTTGCGCTCCTTGGTATTCCGAGGAGCA-TGCCTGTTTGAGTGTCA-TTAAATTCTCTC-AAA----A---CATACA-C-T--T----GA-----GTG---TGTTTTGG-A-TTGT-GGGAGTGT-CTGCTGGC----TTG-TTT----------ATACAT---------------GA-G-CCAGCTCTCCTG-AAAGAC--ATTAGC-TTT----GGGGGGG-A-TGTG-C-CAAGTCACTT--N-TG------------------------------------CCTTTCCATT-------------------------GGTGT-GATAGATGAAT--AAACTTATCTA-CGCCAGG-AAAG--CA----------GGTTGCAGGT-G---AAA-GCAC-T-GT-G-----ATCTC------------------------T-CTGCTCTCT----AA-TT--GA-C-A--------TTT-GTC---TGATAA--------------------------------------------------------------------------------------------------------------------------------------------------------
** - sequence was added after initial calculation of SH-s; (x) - there are x duplicates for this sequence; - click to see the extended view of this SH (all sequences listed)