UNITE - Analysis

rDNA ITS based identification of Eukaryotes and their communication via DOIs

Advanced Analyses

UNITE advanced analyses can be run as EOSC-Nordic services. These include: SH matching, ITSx, massBLASTer, PROTAX-fungi
Login is required to run advanced analyses on PlutoF platform. Alternatively, stand-alone versions of these services are available from GitHub (more info here).

Simple Analyses

massBLASTer

... and choose analysis options:

Output style	Regular mode option
Condensed	1 alignment shown
Regular	2 alignments shown

Datasets to include:
INSD
Envir.
Animal

* Limit of 10 sequences will be kept on public analysis page. Registered users can run massBLASTer and other analyses on larger datasets.

blastn

... and choose analysis options:

Blast e value:

Datasets to include:
INSD*
Envir.*
Animal

* Redundant (identical) sequences have been removed from blastn reference datasets.

SH mappings Map SH taxonomy, EcM lineage(s) and interacting taxa to your SH codes.
Example input format:

SH1383708.08FU
SH1296376.08FU
SH2300025.08FU